Package: IDConverter 0.3.5

IDConverter: Convert Identifiers in Biological Databases

Identifiers in biological databases connect different levels of metadata, phenotype data or genotype data. This tool is designed to easily convert identifiers within or between different biological databases (Wang, Shixiang, et al. (2021) <doi:10.1371/journal.pgen.1009557>).

Authors:Shixiang Wang [aut, cre]

IDConverter_0.3.5.tar.gz
IDConverter_0.3.5.zip(r-4.5)IDConverter_0.3.5.zip(r-4.4)IDConverter_0.3.5.zip(r-4.3)
IDConverter_0.3.5.tgz(r-4.4-any)IDConverter_0.3.5.tgz(r-4.3-any)
IDConverter_0.3.5.tar.gz(r-4.5-noble)IDConverter_0.3.5.tar.gz(r-4.4-noble)
IDConverter_0.3.5.tgz(r-4.4-emscripten)IDConverter_0.3.5.tgz(r-4.3-emscripten)
IDConverter.pdf |IDConverter.html
IDConverter/json (API)
NEWS

# Install IDConverter in R:
install.packages('IDConverter', repos = c('https://shixiangwang.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/shixiangwang/idconverter/issues

Datasets:
  • icgc - ICGC Sample Identifiers
  • pcawg_full - PCAWG Full Sample Identifiers
  • pcawg_simple - PCAWG Mutation Related Simplified Sample Identifiers
  • tcga - TCGA Case Identifiers

On CRAN:

9 exports 8 stars 1.08 score 20 dependencies 44 downloads

Last updated 10 months agofrom:af8b5455ba9cc061dc0448ec359d54edd799f04e

Exports:convert_customconvert_hm_genesconvert_icgcconvert_pcawgconvert_tcgafilter_tcga_barcodesload_datals_annotablesparse_gdc_file_uuid

Dependencies:askpassclicurldata.tablefansigluehttrjsonlitelifecyclemagrittrmimeopensslpillarpkgconfigR6rlangsystibbleutf8vctrs