{ "_id": "6a129203acfb0bcc41d0b1c1", "Package": "IDConverter", "Title": "Convert Identifiers in Biological Databases", "Version": "0.3.5", "Date": "2023-03-14", "Authors@R": "person(\"Shixiang\", \"Wang\", , \"w_shixiang@163.com\", role = c(\"aut\", \"cre\"),\ncomment = c(ORCID = \"0000-0001-9855-7357\"))", "Maintainer": "Shixiang Wang ", "Description": "Identifiers in biological databases connect different\nlevels of metadata, phenotype data or genotype data. This tool\nis designed to easily convert identifiers within or between\ndifferent biological databases (Wang, Shixiang, et al. (2021)\n).", "License": "MIT + file LICENSE", "URL": "https://github.com/ShixiangWang/IDConverter", "BugReports": "https://github.com/ShixiangWang/IDConverter/issues", "Encoding": "UTF-8", "LazyData": "true", "Roxygen": "list(markdown = TRUE, roclets = c(\"collate\", \"namespace\",\n\"rd\", \"roxytest::testthat_roclet\"))", "RoxygenNote": "7.2.0", "Config/pak/sysreqs": "libssl-dev", "Repository": "https://shixiangwang.r-universe.dev", "Date/Publication": "2023-08-23 06:32:34 UTC", "RemoteUrl": "https://github.com/ShixiangWang/IDConverter", "RemoteRef": "HEAD", "RemoteSha": "af8b5455ba9cc061dc0448ec359d54edd799f04e", "NeedsCompilation": "no", "Packaged": { "Date": "2026-05-24 05:49:18 UTC", "User": "root" }, "Author": "Shixiang Wang [aut, cre] (ORCID:\n)", "MD5sum": "db9806d844c775953ce4b415f8ed5ea5", "_user": "shixiangwang", "_type": "src", "_file": "IDConverter_0.3.5.tar.gz", "_fileid": "5c3c9e76fe6602c325bbe45226f98959ae11de564d94bb3207c2c204e5121555", "_filesize": 127602, "_sha256": "5c3c9e76fe6602c325bbe45226f98959ae11de564d94bb3207c2c204e5121555", "_created": "2026-05-24T05:49:18.000Z", "_published": "2026-05-24T05:52:03.027Z", "_distro": "noble", "_jobs": [ { "job": 77575242977, "time": 137, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "7182643225" }, { "job": 77575242979, "time": 125, "config": "linux-release-x86_64", "r": "4.6.0", "check": "OK", "artifact": "7182641825" }, { "job": 77575242981, "time": 73, "config": "macos-oldrel-arm64", "r": "4.5.3", "check": "OK", "artifact": "7182636493" }, { "job": 77575242975, "time": 86, "config": "macos-release-arm64", "r": "4.6.0", "check": "OK", "artifact": "7182637805" }, { "job": 77575114442, "time": 166, "config": "source", "r": "4.6.0", "check": "OK", "artifact": "7182628301" }, { "job": 77575242974, "time": 104, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "7182639615" }, { "job": 77575242988, "time": 81, "config": "windows-devel", "r": "4.7.0", "check": "OK", "artifact": "7182637338" }, { "job": 77575242985, "time": 98, "config": "windows-oldrel", "r": "4.5.3", "check": "OK", "artifact": "7182639116" }, { "job": 77575242990, "time": 73, "config": "windows-release", "r": "4.6.0", "check": "OK", "artifact": "7182636427" } ], "_buildurl": "https://github.com/r-universe/shixiangwang/actions/runs/26353254376", "_status": "success", "_host": "GitHub-Actions", "_upstream": "https://github.com/ShixiangWang/IDConverter", "_commit": { "id": "af8b5455ba9cc061dc0448ec359d54edd799f04e", "author": "ShixiangWang ", "committer": "ShixiangWang ", "message": "bump version\n", "time": 1692772354 }, "_maintainer": { "name": "Shixiang Wang", "email": "w_shixiang@163.com", "login": "shixiangwang", "orcid": "0000-0001-9855-7357", "twitter": "@WangShxiang", "description": "形每万变，神唯守一。", "uuid": 25057508 }, "_registered": true, "_dependencies": [ { "package": "R", "version": ">= 3.5.0", "role": "Depends" }, { "package": "data.table", "role": "Imports" }, { "package": "httr", "role": "Imports" }, { "package": "tibble", "role": "Imports" }, { "package": "covr", "role": "Suggests" }, { "package": "readr", "role": "Suggests" }, { "package": "testthat", "role": "Suggests" } ], "_owner": "shixiangwang", "_selfowned": true, "_usedby": 0, "_updates": [], "_tags": [], "_stars": 9, "_contributors": [ { "user": "shixiangwang", "count": 36, "uuid": 25057508 } ], "_userbio": { "uuid": 25057508, "type": "user", "name": "Shixiang Wang (王诗翔)", "description": "形每万变，神唯守一。" }, "_downloads": { "count": 25, "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/IDConverter" }, "_devurl": "https://github.com/shixiangwang/idconverter", "_searchresults": 28, "_rbuild": "4.6.0", "_assets": [ "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/IDConverter.html", "extra/NEWS.html", "extra/NEWS.txt", "extra/readme.html", "extra/readme.md", "manual.pdf" ], "_cranurl": false, "_releases": [ { "version": "0.2.0", "date": "2022-03-09" }, { "version": "0.3.0", "date": "2022-03-11" }, { "version": "0.3.2", "date": "2022-06-03" }, { "version": "0.3.3", "date": "2022-08-15" }, { "version": "0.3.4", "date": "2023-03-14" } ], "_exports": [ "convert_custom", "convert_hm_genes", "convert_icgc", "convert_pcawg", "convert_tcga", "filter_tcga_barcodes", "load_data", "ls_annotables", "parse_gdc_file_uuid" ], "_help": [ { "page": "convert_custom", "title": "Convert Identifiers with Custom Database", "topics": [ "convert_custom" ] }, { "page": "convert_hm_genes", "title": "Convert Human/Mouse Gene IDs between Ensembl and Hugo Symbol System", "topics": [ "convert_hm_genes" ] }, { "page": "convert_icgc", "title": "Convert ICGC Identifiers", "topics": [ "convert_icgc" ] }, { "page": "convert_pcawg", "title": "Convert PCAWG Identifiers", "topics": [ "convert_pcawg" ] }, { "page": "convert_tcga", "title": "Convert TCGA Identifiers", "topics": [ "convert_tcga" ] }, { "page": "filter_tcga_barcodes", "title": "Filter TCGA Replicate Sample Barcodes", "topics": [ "filter_tcga_barcodes" ] }, { "page": "icgc", "title": "ICGC Sample Identifiers", "topics": [ "icgc" ] }, { "page": "load_data", "title": "Load Data from Local or Remote Zenodo Repository", "topics": [ "load_data" ] }, { "page": "ls_annotables", "title": "List Annotation Tables from 'annotables' package", "topics": [ "ls_annotables" ] }, { "page": "parse_gdc_file_uuid", "title": "Parse Sample ID from GDC Portal File UUID", "topics": [ "parse_gdc_file_uuid" ] }, { "page": "pcawg_full", "title": "PCAWG Full Sample Identifiers", "topics": [ "pcawg_full" ] }, { "page": "pcawg_simple", "title": "PCAWG Mutation Related Simplified Sample Identifiers", "topics": [ "pcawg_simple" ] }, { "page": "tcga", "title": "TCGA Case Identifiers", "topics": [ "tcga" ] } ], "_readme": "https://github.com/ShixiangWang/IDConverter/raw/HEAD/README.md", "_rundeps": [ "askpass", "cli", "curl", "data.table", "glue", "httr", "jsonlite", "lifecycle", "magrittr", "mime", "openssl", "pillar", "pkgconfig", "R6", "rlang", "sys", "tibble", "utf8", "vctrs" ], "_score": 3.1003705451175625, "_indexed": true, "_nocasepkg": "idconverter", "_universes": [ "shixiangwang" ], "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "0.3.5", "date": "2026-05-24T05:51:23.000Z", "distro": "noble", "commit": "af8b5455ba9cc061dc0448ec359d54edd799f04e", "fileid": "9a95b04b7eb37f429b1c1130b18bd1b9fbe2799f16da141e9f6d373ad2dca08d", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/shixiangwang/actions/runs/26353254376" }, { "r": "4.6.0", "os": "linux", "version": "0.3.5", "date": "2026-05-24T05:51:10.000Z", "distro": "noble", "commit": "af8b5455ba9cc061dc0448ec359d54edd799f04e", "fileid": "121a43bcef7be846f1e60e587a918f3916b88ac29dc018980291ccdebe051eea", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/shixiangwang/actions/runs/26353254376" }, { "r": "4.5.3", "os": "mac", "version": "0.3.5", "date": "2026-05-24T05:50:30.000Z", "commit": "af8b5455ba9cc061dc0448ec359d54edd799f04e", "fileid": "536760fb99ed803cb26f7a44a87869339a2f5a7c7cc9bd800434dd2b70837534", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/shixiangwang/actions/runs/26353254376" }, { "r": "4.6.0", "os": "mac", "version": "0.3.5", "date": "2026-05-24T05:50:36.000Z", "commit": "af8b5455ba9cc061dc0448ec359d54edd799f04e", "fileid": "074dfcd4d3c8fda951f34f5fdbd681288925ec53cc8ebda3de873de2edc7db7d", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/shixiangwang/actions/runs/26353254376" }, { "r": "4.6.0", "os": "wasm", "version": "0.3.5", "date": "2026-05-24T05:51:15.000Z", "commit": "af8b5455ba9cc061dc0448ec359d54edd799f04e", "fileid": "af9f4fae10d1d78e311337d2331eb5d52fdf7132daaed108bf9b935f769d7762", "status": "success", "buildurl": "https://github.com/r-universe/shixiangwang/actions/runs/26353254376" }, { "r": "4.7.0", "os": "win", "version": "0.3.5", "date": "2026-05-24T05:50:27.000Z", "commit": "af8b5455ba9cc061dc0448ec359d54edd799f04e", "fileid": "a4d35b97c97c183e0f69048a38f13cdeefd872729f330a10b061d86fa02e6143", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/shixiangwang/actions/runs/26353254376" }, { "r": "4.5.3", "os": "win", "version": "0.3.5", "date": "2026-05-24T05:50:36.000Z", "commit": "af8b5455ba9cc061dc0448ec359d54edd799f04e", "fileid": "858f019b5e48495bad691895bd462c7a14441e8c048cec78a3e64bc87dc392a2", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/shixiangwang/actions/runs/26353254376" }, { "r": "4.6.0", "os": "win", "version": "0.3.5", "date": "2026-05-24T05:50:19.000Z", "commit": "af8b5455ba9cc061dc0448ec359d54edd799f04e", "fileid": "c79ee08a224c30a747b8070d3846a62336e2879e2e8433a8aaf0e63b7bff5e33", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/shixiangwang/actions/runs/26353254376" } ] }