1. contribution::CRediT
    CRediT
    csv| xlsx| json| ndjson| rda| rds
    spec_tbl_df|14 x 2
  2. contribution::demo
    A demo for plotting contribution table
    csv| xlsx| json| ndjson| rda| rds
    tbl_df|5 x 4
  3. contribution::palette
    palette
    csv| xlsx| json| ndjson| rda| rds
    tbl_df|5 x 27
  4. contribution::CRediT
    CRediT
    csv| xlsx| json| ndjson| rda| rds
    spec_tbl_df|14 x 2
  5. contribution::demo
    A demo for plotting contribution table
    csv| xlsx| json| ndjson| rda| rds
    tbl_df|5 x 4
  6. contribution::palette
    palette
    csv| xlsx| json| ndjson| rda| rds
    tbl_df|5 x 27
  7. copynumber::BAF
    Artificial SNP array data
    csv| xlsx| json| ndjson| rda| rds
    data.frame|10000 x 4
  8. copynumber::logR
    Artificial SNP array data
    csv| xlsx| json| ndjson| rda| rds
    data.frame|10000 x 4
  9. copynumber::lymphoma
    3K aCGH data
    csv| xlsx| json| ndjson| rda| rds
    data.frame|3091 x 23
  10. copynumber::micma
    Subset of 244K aCGH data
    csv| xlsx| json| ndjson| rda| rds
    data.frame|7658 x 8
  11. gcap::ascn
    Example allele specific copy number (ASCN) data
    csv| xlsx| json| ndjson| rda| rds
    data.frame|129 x 6
  12. gcap::ec
    Example ecDNA training data
    csv| xlsx| json| ndjson| rda| rds
    data.table|2020 x 54
  13. gcap::oncogenes
    Oncogene list
    csv| xlsx| json| ndjson| rda| rds
    data.table|803 x 8
  14. IDConverter::icgc
    ICGC Sample Identifiers
    json| rda| rds
  15. IDConverter::pcawg_full
    PCAWG Full Sample Identifiers
    json| rda| rds
  16. IDConverter::pcawg_simple
    PCAWG Mutation Related Simplified Sample Identifiers
    json| rda| rds
  17. IDConverter::tcga
    TCGA Case Identifiers
    json| rda| rds
  18. metawho::wang2019
    Hazard ratio (HR) for disease progression analysis comparing TMB-high with TMB-low in three NSCLC datasets
    csv| xlsx| json| ndjson| rda| rds
    data.frame|6 x 10
  19. phylotaR::aotus
    aotus
    rda| rds
    Phylota
  20. phylotaR::birds
    birds
    rda| rds
    TreeMan
  21. phylotaR::bromeliads
    bromeliads
    rda| rds
    Phylota
  22. phylotaR::cycads
    cycads
    rda| rds
    Phylota
  23. phylotaR::dragonflies
    dragonflies
    rda| rds
    Phylota
  24. phylotaR::mammals
    mammals
    rda| rds
    TreeMan
  25. phylotaR::plants
    plants
    rda| rds
    TreeMan
  26. phylotaR::sturgeons
    sturgeons
    rda| rds
    Phylota
  27. phylotaR::tardigrades
    tardigrades
    rda| rds
    Phylota
  28. phylotaR::tinamous
    tinamous
    rda| rds
    Phylota
  29. phylotaR::yeasts
    yeasts
    rda| rds
    Phylota
  30. sigminer::CN.features
    Classification Table of Copy Number Features Devised by Wang et al. for Method 'W'
    csv| xlsx| json| ndjson| rda| rds
    data.table|80 x 5
  31. sigminer::centromeres.T2T
    Location of Centromeres at Genome Build T2T
    csv| xlsx| json| ndjson| rda| rds
    data.frame|23 x 3
  32. sigminer::centromeres.hg19
    Location of Centromeres at Genome Build hg19
    csv| xlsx| json| ndjson| rda| rds
    data.frame|24 x 3
  33. sigminer::centromeres.hg38
    Location of Centromeres at Genome Build hg38
    csv| xlsx| json| ndjson| rda| rds
    data.frame|24 x 3
  34. sigminer::centromeres.mm10
    Location of Centromeres at Genome Build mm10
    csv| xlsx| json| ndjson| rda| rds
    data.frame|21 x 3
  35. sigminer::centromeres.mm9
    Location of Centromeres at Genome Build mm9
    csv| xlsx| json| ndjson| rda| rds
    data.frame|21 x 3
  36. sigminer::chromsize.T2T
    Chromosome Size of Genome Build T2T
    csv| xlsx| json| ndjson| rda| rds
    data.frame|25 x 2
  37. sigminer::chromsize.hg19
    Chromosome Size of Genome Build hg19
    csv| xlsx| json| ndjson| rda| rds
    data.frame|93 x 2
  38. sigminer::chromsize.hg38
    Chromosome Size of Genome Build hg38
    csv| xlsx| json| ndjson| rda| rds
    data.frame|455 x 2
  39. sigminer::chromsize.mm10
    Chromosome Size of Genome Build mm10
    csv| xlsx| json| ndjson| rda| rds
    data.frame|66 x 2
  40. sigminer::chromsize.mm9
    Chromosome Size of Genome Build mm9
    csv| xlsx| json| ndjson| rda| rds
    data.frame|35 x 2
  41. sigminer::cytobands.T2T
    Location of Chromosome Cytobands at Genome Build T2T
    csv| xlsx| json| ndjson| rda| rds
    data.frame|862 x 5
  42. sigminer::cytobands.hg19
    Location of Chromosome Cytobands at Genome Build hg19
    csv| xlsx| json| ndjson| rda| rds
    data.frame|862 x 5
  43. sigminer::cytobands.hg38
    Location of Chromosome Cytobands at Genome Build hg38
    csv| xlsx| json| ndjson| rda| rds
    data.frame|862 x 5
  44. sigminer::cytobands.mm10
    Location of Chromosome Cytobands at Genome Build mm10
    csv| xlsx| json| ndjson| rda| rds
    data.frame|403 x 5
  45. sigminer::cytobands.mm9
    Location of Chromosome Cytobands at Genome Build mm9
    csv| xlsx| json| ndjson| rda| rds
    data.frame|403 x 5
  46. sigminer::simulated_catalogs
    A List of Simulated SBS-96 Catalog Matrix
    csv| json| rda| rds
    list
  47. sigminer::transcript.T2T
    Merged Transcript Location at Genome Build T2T
    csv| xlsx| json| ndjson| rda| rds
    data.table|18250 x 4
  48. sigminer::transcript.hg19
    Merged Transcript Location at Genome Build hg19
    csv| xlsx| json| ndjson| rda| rds
    data.table|18357 x 4
  49. sigminer::transcript.hg38
    Merged Transcript Location at Genome Build hg38
    csv| xlsx| json| ndjson| rda| rds
    data.table|18288 x 4
  50. sigminer::transcript.mm10
    Merged Transcript Location at Genome Build mm10
    csv| xlsx| json| ndjson| rda| rds
    data.table|20964 x 4
  51. sigminer::transcript.mm9
    Merged Transcript Location at Genome Build mm9
    csv| xlsx| json| ndjson| rda| rds
    data.table|21719 x 4
  52. UCSCXenaShiny::TCGA.organ
    TCGA: Organ Data
    csv| xlsx| json| ndjson| rda| rds
    data.frame|33 x 3
  53. UCSCXenaShiny::ccle_absolute
    ABSOLUTE Result of CCLE Database
    csv| xlsx| json| ndjson| rda| rds
    tbl_df|998 x 5
  54. UCSCXenaShiny::ccle_info
    Phenotype Info of CCLE Database
    csv| xlsx| json| ndjson| rda| rds
    data.frame|1046 x 14
  55. UCSCXenaShiny::ccle_info_fine
    Cleaned Phenotype Info of CCLE Database for grouping
    csv| xlsx| json| ndjson| rda| rds
    tbl_df|1046 x 5
  56. UCSCXenaShiny::pcawg_info
    Phenotype Info of PCAWG Database
    csv| xlsx| json| ndjson| rda| rds
    tbl_df|6231 x 27
  57. UCSCXenaShiny::pcawg_info_fine
    Cleaned Phenotype Info of PCAWG Database for grouping
    csv| xlsx| json| ndjson| rda| rds
    tbl_df|1523 x 5
  58. UCSCXenaShiny::pcawg_purity
    Purity Data of PCAWG
    csv| xlsx| json| ndjson| rda| rds
    spec_tbl_df|2778 x 6
  59. UCSCXenaShiny::tcga_clinical
    Toil Hub: TCGA Clinical Data
    csv| xlsx| json| ndjson| rda| rds
    tbl_df|12653 x 22
  60. UCSCXenaShiny::tcga_clinical_fine
    Toil Hub: Cleaned TCGA Clinical Data for grouping
    csv| xlsx| json| ndjson| rda| rds
    tbl_df|12591 x 8
  61. UCSCXenaShiny::tcga_genome_instability
    TCGA: Genome Instability Data
    csv| xlsx| json| ndjson| rda| rds
    data.frame|9997 x 6
  62. UCSCXenaShiny::tcga_gtex
    Toil Hub: Merged TCGA GTEx Selected Phenotype
    csv| xlsx| json| ndjson| rda| rds
    data.frame|18102 x 4
  63. UCSCXenaShiny::tcga_purity
    TCGA: Purity Data
    csv| xlsx| json| ndjson| rda| rds
    tbl_df|9364 x 7
  64. UCSCXenaShiny::tcga_subtypes
    TCGA Subtype Data
    csv| xlsx| json| ndjson| rda| rds
    data.frame|10469 x 10
  65. UCSCXenaShiny::tcga_surv
    Toil Hub: TCGA Survival Data
    csv| xlsx| json| ndjson| rda| rds
    data.frame|10496 x 9
  66. UCSCXenaShiny::toil_info
    Toil Hub: TCGA TARGET GTEX Selected Phenotype
    csv| xlsx| json| ndjson| rda| rds
    data.frame|19131 x 7
  67. UCSCXenaShiny::TCGA.organ
    TCGA: Organ Data
    csv| xlsx| json| ndjson| rda| rds
    data.frame|33 x 3
  68. UCSCXenaShiny::ccle_absolute
    ABSOLUTE Result of CCLE Database
    csv| xlsx| json| ndjson| rda| rds
    tbl_df|998 x 5
  69. UCSCXenaShiny::ccle_info
    Phenotype Info of CCLE Database
    csv| xlsx| json| ndjson| rda| rds
    data.frame|1046 x 14
  70. UCSCXenaShiny::ccle_info_fine
    Cleaned Phenotype Info of CCLE Database for grouping
    csv| xlsx| json| ndjson| rda| rds
    tbl_df|1046 x 5
  71. UCSCXenaShiny::pcawg_info
    Phenotype Info of PCAWG Database
    csv| xlsx| json| ndjson| rda| rds
    tbl_df|6231 x 27
  72. UCSCXenaShiny::pcawg_info_fine
    Cleaned Phenotype Info of PCAWG Database for grouping
    csv| xlsx| json| ndjson| rda| rds
    tbl_df|1523 x 5
  73. UCSCXenaShiny::pcawg_purity
    Purity Data of PCAWG
    csv| xlsx| json| ndjson| rda| rds
    spec_tbl_df|2778 x 6
  74. UCSCXenaShiny::tcga_clinical
    Toil Hub: TCGA Clinical Data
    csv| xlsx| json| ndjson| rda| rds
    tbl_df|12653 x 22
  75. UCSCXenaShiny::tcga_clinical_fine
    Toil Hub: Cleaned TCGA Clinical Data for grouping
    csv| xlsx| json| ndjson| rda| rds
    tbl_df|12591 x 8
  76. UCSCXenaShiny::tcga_genome_instability
    TCGA: Genome Instability Data
    csv| xlsx| json| ndjson| rda| rds
    data.frame|9997 x 6
  77. UCSCXenaShiny::tcga_gtex
    Toil Hub: Merged TCGA GTEx Selected Phenotype
    csv| xlsx| json| ndjson| rda| rds
    data.frame|18102 x 4
  78. UCSCXenaShiny::tcga_purity
    TCGA: Purity Data
    csv| xlsx| json| ndjson| rda| rds
    tbl_df|9364 x 7
  79. UCSCXenaShiny::tcga_subtypes
    TCGA Subtype Data
    csv| xlsx| json| ndjson| rda| rds
    data.frame|10469 x 10
  80. UCSCXenaShiny::tcga_surv
    Toil Hub: TCGA Survival Data
    csv| xlsx| json| ndjson| rda| rds
    data.frame|10496 x 9
  81. UCSCXenaShiny::toil_info
    Toil Hub: TCGA TARGET GTEX Selected Phenotype
    csv| xlsx| json| ndjson| rda| rds
    data.frame|19131 x 7
  82. UCSCXenaTools::XenaData
    Xena Hub Information
    csv| xlsx| json| ndjson| rda| rds
    tbl_df|1686 x 17
  83. UCSCXenaTools::XenaData
    Xena Hub Information
    csv| xlsx| json| ndjson| rda| rds
    tbl_df|1686 x 17