Package: neopeptides 0.1.0

neopeptides: Calculate and Explore Property Indices of Neopeptides

Includes functions to calculate and explore several property indices for neopeptides, which are abnormal peptides generated from genome.

Authors:Shixiang Wang [aut, cre]

neopeptides_0.1.0.tar.gz
neopeptides_0.1.0.zip(r-4.7-any)neopeptides_0.1.0.zip(r-4.6-any)neopeptides_0.1.0.zip(r-4.5-any)
neopeptides_0.1.0.tgz(r-4.6-any)neopeptides_0.1.0.tgz(r-4.5-any)
neopeptides_0.1.0.tar.gz(r-4.7-any)neopeptides_0.1.0.tar.gz(r-4.6-any)
neopeptides_0.1.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
neopeptides/json (API)

# Install 'neopeptides' in R:
install.packages('neopeptides', repos = c('https://shixiangwang.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/shixiangwang/neopeptides/issues

On CRAN:

Conda:

somaticmutationimmunooncologyalignmentimmunotherapyneoantigenpeptides

2.18 score 3 stars 2 scripts 8 exports 29 dependencies

Last updated from:6aff6c735d. Checks:7 WARNING, 2 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-develWARNING90
source / vignettesOK146
linux-releaseWARNING104
macos-releaseWARNING105
macos-oldrelWARNING102
windows-develWARNING89
windows-releaseWARNING59
windows-oldrelWARNING61
wasm-releaseOK87

Exports:%>%calc_dissimilaritycalc_geometric_meancalc_harmonic_meancalc_iedb_scorefind_pathinstall_databaseset_blast_path

Dependencies:BiocGenericsBiostringsclicrayondata.tablegenericsglueGPArotationIRangeslatticelifecyclemagrittrmnormtnlmePeptidespsychpurrrR.methodsS3R.ooR.utilsRcpprlangS4VectorsSeqinfostringistringrvctrsXVectoryaml