Title: | Query and Download SRA Files from NCBI |
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Description: | Query and download SRA files from NCBI with 'wget'. |
Authors: | Shixiang Wang [aut, cre] |
Maintainer: | Shixiang Wang <[email protected]> |
License: | GPL (>= 3) |
Version: | 0.2.2 |
Built: | 2024-08-20 02:27:52 UTC |
Source: | https://github.com/ShixiangWang/rsra |
Query and download SRA files from NCBI
rsra( idList, prefetch = NULL, outdir = getwd(), progress = TRUE, location = c("AWS", "NCBI"), opts = "-r yes -C yes" )
rsra( idList, prefetch = NULL, outdir = getwd(), progress = TRUE, location = c("AWS", "NCBI"), opts = "-r yes -C yes" )
idList |
a list of cases to download. |
prefetch |
if not |
outdir |
output directory, default is working directory. |
progress |
if |
location |
one of "AWS" or "NCBI" for download server. "GCAP" is not available due to its limit. |
opts |
options work with |
Nothing